2DM5: Thermodynamic Penalty Arising From Burial of a Ligand Polar Group Within a Hydrophobic Pocket of a Protein Receptor

PDB ID: 2DM5Download
MMDB ID: 42046
PDB Deposition Date: 2006/4/20
Updated in MMDB: 2006/11
Experimental Method:
x-ray diffraction
Resolution: 1.7  Å
Source Organism:
Similar Structures:
Biological Unit for 2DM5: monomeric; determined by author
Molecular Components in 2DM5
Label Count Molecule
Protein (1 molecule)
1
Major Urinary Protein
(Gene symbol: Mup2)
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
4
CADMIUM IONCADMIUM ION
2
1
OCTANE-1,8-DIOLOCTANE-1,8-DIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303